Awk script runs, no error, no output

[DeepNik]

I have simple awk scripts which copies information from one file based on the conditions satisfied and pastes to another. When I execute this script, no eeor is invoked, it just runs without doing anything and when I abort it using ctrl D, it executes END loop and prints Done on the terminal. What is wrong with my script. Any suggestion/advice.

Thank you.
Deepa

#!/bin/awk -f
BEGIN {
f1="all_CopyM.txt";
f2= "all_domega.txt";
}
{
if ($1 == "A" || "T" && $6 == "ASN" || $6 == "GLN" || $6 == "PRO" || $6 == "THR" || $6 == "SER" || $6 == "CYS"){
    print $0 f1 > f2 ;
    }
}
 
END {
    print "Done";
}
 

[numberwhun]

I don't know if its just me, but I don't see where you are setting up variables $1 and $6. You defined f1 and f2 and did an if statement. There is nothing to lead up to the if statement for it to go on. The program did exactly as it was told.

Regards,

Jeff

[rski]

You didn't see the source file but i think the if statement should be

if ((($1 == "A")||($1== "T")) && ($6 == "ASN" || $6 == "GLN" || $6 == "PRO" || $6 == "THR" || $6 == "SER" || $6 == "CYS")){