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Bioperl Restriction enzyme help please

Hi

I am trying to run this perl script

#!/usr/bin/perl

use Bio::Restriction::EnzymeCollection;
my $all_collection = Bio::Restriction::EnzymeCollection;

my $six_cutter_collection = $all_collection->cutters(6);
foreach my $enz ($six_cutter_collection){
print $enz->name,"\t",$enz->site,"\t",$enz->overhang_seq,"\n";
# prints name, recognition site, overhang
}

but i keep getting the error message "can't use string
"Bio::Restriction::EnzymeCollection;" while strict refs are in use at
.../././../EnzymeCollection.pm line 238.

I have no access to change the modules,

please can you help

simon
Jul 19 '05 #1
2 2602
rhahn
1
This is exactly the question I was searching an answer too.

Have you found out something in the meantime?
Would be nice if you post the solution if you have one.

Cheers Raphael
Sep 22 '05 #2
Can you do:
my $new_collection = Bio::Restriction::EnzymeCollection();
?
Oct 5 '05 #3

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